{ "_id": "6a214188cd65a98ecbd2a7ea", "Package": "StrathE2E2", "Version": "3.3.0", "Title": "End-to-End Marine Food Web Model", "Author": "Michael Heath [aut], Ian Thurlbeck [ctb]", "Maintainer": "Michael Heath ", "Description": "A dynamic model of the big-picture, whole ecosystem\neffects of hydrodynamics, temperature, nutrients, and fishing\non continental shelf marine food webs. 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Monte Carlo baseline and scenario model runs.", "topics": [ "e2e_compare_runs_box" ] }, { "page": "e2e_copy", "title": "Make a copy of a named model/variant and documentation in a user defined workspace", "topics": [ "e2e_copy" ] }, { "page": "e2e_extract_hr", "title": "Extract the values of harvest ratios generated by the fleet model.", "topics": [ "e2e_extract_hr" ] }, { "page": "e2e_extract_start", "title": "Extract the values of all the state variables at the end of a model run and format for use as new initial conditions.", "topics": [ "e2e_extract_start" ] }, { "page": "e2e_get_parmdoc", "title": "Get documentation on the parameters in the model.", "topics": [ "e2e_get_parmdoc" ] }, { "page": "e2e_get_senscrit", "title": "Get documentation on the model outputs available as the basis for sensitivity analysis.", "topics": [ "e2e_get_senscrit" ] }, { "page": "e2e_ls", "title": "List the available models in a designated workspace.", "topics": [ "e2e_ls" ] }, { "page": "e2e_merge_sens_mc", "title": "Combine two or more sets of raw output data from parallel sensitivity or Monte Carlo analysis runs performed on separate machines/processors.", "topics": [ "e2e_merge_sens_mc" ] }, { "page": "e2e_optimize_act", "title": "Optimize StrathE2E fishing gear activity multipliers to maximumize the likelihood of either observed ecosystem target data or know harvest ratios.", "topics": [ "e2e_optimize_act" ] }, { "page": "e2e_optimize_eco", "title": "Optimize StrathE2E ecology model parameters to maximise the likelihood of observed ecosystem target data.", "topics": [ "e2e_optimize_eco" ] }, { "page": "e2e_optimize_hr", "title": "Optimize StrathE2E harvest ratio multipliers to maximum the likelihood of observed ecosystem target data.", "topics": [ "e2e_optimize_hr" ] }, { "page": "e2e_plot_biomass", "title": "Plot showing the annual annual average biomass densities of each guild in the inshore and offshore zones, optionally with credible intervals.", "topics": [ 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